Interaction-motif-based classification of self-organizing metabolic cycles

New Journal of Physics IOP Publishing 25:10 (2023) 103013-103013

Authors:

Vincent Ouazan-Reboul, Ramin Golestanian, Jaime Agudo-Canalejo

Abstract:

Particles that are catalytically-active and chemotactic can interact through the concentration fields upon which they act, which in turn may lead to wide-scale spatial self-organization. When these active particles interact through several fields, these interactions gain an additional structure, which can result in new forms of collective behavior. Here, we study a mixture of active species which catalyze the conversion of a substrate chemical into a product chemical, and chemotax in concentration gradients of both substrate and product. Such species develop non-reciprocal, specific interactions that we coarse-grain into attractive and repulsive, which can lead to a potentially complex interaction network. We consider the particular case of a metabolic cycle of three species, each of which interacts with itself and both other species in the cycle. We find that the stability of a cycle of species that only chemotax in gradients of their substrate is piloted by a set of two parameter-free conditions, which we use to classify the low number of corresponding interaction networks. In the more general case of substrate- and product-chemotactic species, we can derive a set of two high-dimensional stability conditions, which can be used to classify the stability of all the possible interaction networks based on the self- and pair-interaction motifs they contain. The classification scheme that we introduce can help guide future studies on the dynamics of complex interaction networks and explorations of the corresponding large parameter spaces in such metabolically active complex systems

Eigenstate correlations, the eigenstate thermalization hypothesis, and quantum information dynamics in chaotic many-body quantum systems

(2023)

Authors:

Dominik Hahn, David J Luitz, JT Chalker

Network Effects Lead to Self-Organization in Metabolic Cycles of Self-Repelling Catalysts

Physical Review Letters American Physical Society (APS) 131:12 (2023) 128301

Authors:

Vincent Ouazan-Reboul, Ramin Golestanian, Jaime Agudo-Canalejo

Conformal field theory approach to parton fractional quantum Hall trial wave functions

(2023)

Authors:

Greg J Henderson, GJ Sreejith, Steven H Simon

Critical lines and ordered phases in a Rydberg-blockade ladder

Physical Review B American Physical Society 108:12 (2023) 125135

Authors:

Luisa Eck, Paul Fendley

Abstract:

Arrays of Rydberg atoms in the blockade regime realize a wealth of strongly correlated quantum physics, but theoretical analysis beyond the chain is rather difficult. Here we study a tractable model of Rydberg-blockade atoms on the square ladder with a Z2脳Z2 symmetry and at most one excited atom per square. We find D4, Z2, and Z3 density-wave phases separated by critical and first-order quantum phase transitions. A noninvertible remnant of U(1) symmetry applies to our full three-parameter space of couplings, and its presence results in a larger critical region as well as two distinct Z3-broken phases. Along an integrable line of couplings, the model exhibits a self-duality that is spontaneously broken along a first-order transition. Aided by numerical results, perturbation theory, and conformal field theory, we also find critical Ising2 and three-state Potts transitions, and provide good evidence that the latter can be chiral.