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Prof Sonia Antoranz Contera

Professor of Biological Physics

Sub department

  • Condensed Matter Physics
Sonia.AntoranzContera@physics.ox.ac.uk
Telephone: 01865 (2)72269
Clarendon Laboratory, room 208
  • About
  • Publications
Conversation on physics bioinspired materials and the future of architecture

Amphiphilic DNA tiles for controlled insertion and 2D assembly on fluid lipid membranes: Effect on mechanical properties

Nanoscale Royal Society of Chemistry 9:9 (2017) 3051-3058

Authors:

Chikara Dohno, Shingo Makishi, Kzuhiko Nakatani, Sonia Antoranz Contera

Abstract:

Future lipid membrane-associated DNA nanostructures are expected to find applications ranging from synthetic biology to nanomedicine. Here we have designed and synthesized DNA tiles and modified them by amphiphilic covalent moieties. dod-DEG groups, which consist of a hydrophilic diethylene glycol (DEG) and a hydrophobic dodecyl group, are introduced at the phosphate backbone to create amphiphilic DNA strands which are subsequently introduced into one face of DNA tiles. In this way the tile becomes able to stably bind to lipid membranes by insertion of the hydrophobic groups inside the bilayer core. The functionalized tiles do not aggregate in solution. Our results show that these amphiphilic DNA tiles can bind and assemble into 2D lattices on both gel and fluid lipid bilayers. The binding of the DNA structures to membranes is dependent on the lipid phase of the membrane, the concentration of Mg2+ cation, the length of the amphiphilic modifications to the DNA as well as on the density of the modifications within the tile. Atomic force microscopy鈥揵ased force spectroscopy is used to investigate the effect of the inserted DNA tiles on the mechanical properties of the lipid membranes. The results indicate that the insertion of DNA tiles produces an approx. 20% increase of the bilayer breakthrough force.

Magneto-electrical orientation of lipid-coated graphitic micro-particles in solution

(2016)

Authors:

Johnny Nguyen, Sonia Contera, Isabel Llorente Garcia

Magneto-electrical orientation of lipid-coated graphitic micro-particles in solution

RSC Advances Royal Society of Chemistry (RSC) 6:52 (2016) 46643-46653

Authors:

Johnny Nguyen, Sonia Contera, Isabel Llorente Garc铆a

Abstract:

We demonstrate, for the first time, confinement of the orientation of graphitic micro-flakes to a well-defined plane in solution by applying two perpendicular fields: a vertical static magnetic field and a horizontal time-varying electric field.

Designer cantilevers for even more accurate quantitative measurements of biological systems with multifrequency AFM

Nanotechnology IOP Publishing 27:13 (2016) 132501-132501

Developing a single-molecule fluorescence tool to quantify DNA damage

Biophysical Journal Elsevier 110:3 suppl. 1 (2016) p164a

Abstract:

Quantification of DNA damage is an important technique for medical physics, for example to assess damage caused by the quinolone antibiotics, or to examine the effects of novel cancer treatments such as low-temperature plasma therapy on healthy or tumorous cells. Existing damage quantification techniques such as the alkaline comet assay [1] are often subjective in their results, especially at higher damage levels. Methods using immunofluorescence [2] often lose information due to the three dimensional nature of the cell.

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